NRC-Atlantic Bioinformatics Laboratory

The following projects are or were developed in the NRC-IIT Bioinformatics Laboratory. The projects are developed in collaboration with partners and the access to some project webpages may be restricted for the general public.

If you are interested in technology transfer and licensing opportunities related to these projects please contact the NRC-IIT Business Office.

Bioinformatics


 The Circular Secondary Structure Uncertainty Plot (CS2-UPlot): an intuitive visual representation of an RNA secondary structure that includes the uncertainty of all possible base pairings.
[ More info ]


 The Plant Orthology Browser (POB): an Orthology and Gene Order Visualizer for Plant Comparative Genomics.
[ Run ]  [ More info ]

 The Microarray Manual Curation Tool (MMCT): manual qualitative exploration of individual probes on various microarray chipsets (currently only Affymetrix data is available).
[ Run ]  [ More info ]

 The Gene Order Browser: visualization of orthology relationships between Human and Mouse genes.
[ Run ]  [ More info ]

Bioengineering


 Modeling of short DNA duplex hybridization: doublet and triplet-based nearest-neghbour parametric modeling.
[ More info ]


 MicroDes: a specialized software that assists users in the process of designing highly specific DNA probe sequences for a given set of targets.
[ Run ] 

Computational Biology


 MetaboHunter: fast and automatic 1H-NMR metabolite fingerprinting in complex mixtures.
[ Run ]  [ More info ]

Health Informatics


 Find my clinic! Trouvez ma clinique!: a Google Maps application for location of nearby clinics open at user specified times (information currently limitted to New Brunswick).
[ Currently unnavailable due to changes to Google Maps API. ] [ More info ]